Showing posts with label Last minute quick view. Show all posts
Showing posts with label Last minute quick view. Show all posts

Monday, October 31

Notes to Share

Edit: Added more topics.

Assalamualaikum w.b.t

I wish to share some of the notes several sisters have made. Feel free to use them for your revision.

Histology

Haemotology

Pharmacology


IM

I only posted the ones that I have in softcopy. I'm sure many people have made their own notes, but these are the ones I obtained, so I could only share these. If anyone wishes to share the notes they made, feel free to give the softcopy to any PnI member.

Please tell me if there are any problems with the links. I'll fix them ASAP, InsyaAllah.

Happy Studying!

Disclaimer: These notes are not replacements of lecture notes. These are simply to facilitate learning (and memorising). Credit goes to the person who made them.

Monday, April 18

Last minute quick review - Biotyping

Assalamualaikum. Bismillahirrahmanirrahim.
Still remember the Microbe lab? The many many tubes and bottles we have to interpret? Here is a list of mnemonics for you to double check. (sorry, can't put it in the Tips & Tricks thing because my line is so slow here).

Non-lactose fermenters:
"Those who don't drink milk don't PPaSS their exams."
Proteus
Pseudomonas aeruginosa
Salmonella
Shigella

Glucose fermenters but produce NO gasSS.
Salmonella
Shigella

Simon citrate? I tak KiSah.
Klebsiella
Salmonella

Indole +ive: Only E. coli, as far as we need to know la

Urea hydrolysis: Kencing/Pee
Klebsiella
Proteus

H2S (hydrogen sulphide) producers:
SaPe hitam ye? (no offence)
Salmonella
Proteus

Last minute quick review - KKM vaccines from Dr Imad's note

If you’re too lazy to look for this particular note among the sea of notes we have to memorize, then here it is:


0 m
1 m
2 m
3 m
5 m
6 m
12 m
18 m
6 Y
15 Y
BCG
1







If no scar

HepB
1
2


3





DPT


1
2
3


4
DT
T
OPV


1
2
3


4
5

HiB


1
2
3





Measles





Sabah




MMR






1

2

Saturday, April 16

Last minute quick view - Viral Hepatitis

Assalamualaikum. In the name of Allah, the Most Beneficent, the most Merciful.

Characteristics of Hepatitis Viruses
Desease
Component of System & their Definition
Hepatitis A
HAV → Hepatitis A virus. Etiologic agent of infectious hepatitis. A picornavirus, the prototype of genus Hepatovirus.
Anti-HAV → Antibody to HAV. Detectable at onset ot symptoms; lifetime persistence. :D
IgM anti-HAV → IgM class antibody to HAV. Indicates recent infection with hepatitis A; positive up to 4-6 months after infection.
Hepatitis B
HBV → Hepatitis B virus. Etiologic agent of serum hepatitis. A hepadna virus.
HBsAg → Hepatitis B surface antigen. Surface antigen(s) of HBV detectable in large quantity in serum; several subtypes identified.
HBeAg → Hepatitis B e antigen. Associated with HBV nucleocapsid; indicates viral replication; circulates as soluble antigen in serum.
HBcAg → Hepatitis C core antigen.
Anti-HBs → Antibody to HBeAg. Indicates past infection with and immunity to HBV, presence of passive antibody from HBIG, or immune response from HBV vaccine.
Anti-HBe → Antibody to HBeAg. Presence in serum of HBsAg carrier suggests low titer of HBV.
Anti-HBc → Antibody to HBcAg. Indicates infection with HBV at some undefined time in the past.
IgM anti-HBc → IgM class antibody to HBcAg. Indicates recent infection with HBV; positive for 4-6 months after infection.
Hepatitis C
HCV →  Hepatitis C virus, a common etiologic agent of posttransfusion hepatitis. A flavivirus, genus Hepacivirus.
Anti-HCV → Antibody to HCV
Hepatitis D
HDV → Hepatitis D virus. Etiologic agent of delta hepatitis; causes infection only in presence of HBV.
HDAg → Delta antigen (delta-Ag). Detectable in early acute HDV infection.
Anti-HDV → Antibody to delta-Ag (anti-delta). Indicates past or present infection infection with HDV.
Hepatitis E
HEV → Hepatitis V virus. Enterically transmitted hepatitis virus. Cause large epidemics in Asia, North and West Africa, and Mexico; fecal-oral or water-borne transmission. Unclassified.
Immune globulins
IG → Immune globulin USP. Contains antibodies to HAV; no antibodies to HBsAg, HCV, or HIV
HBIG → Hepatitis B immune globulin. Contains high titers of antibodies to HBV.

Last minute quick view - Immunology + Parasitology

Assalamualaikum.

In the Name of Allah, the Most Beneficent the Most Merciful. Just in case you're too lazy to open the notes, personally I find the notes very difficult to read. Hope this helps.

Immune Evasion by Parasites
Parasites have developed many ways to escape from the human immune system so they can thrive successfully while living in the human body.
  1. Escape from Immune Effectors
  1. Intracellular parasites avoid destruction:
E.g.      Toxoplasma gondii enters the human macrophage without using the phagocytic pathway
Leishmania parasites enter macrophages by binding onto the cell receptors. They also has the enzyme superoxide dismustase, which inhibit the respiratory burst
Trypanosome cruzi escapes form the phagosome in the human macrophage into the cytoplasm before fusion of the phagosome and lysosome happens.
Plasmodium parasites are protected inside RBCs.
  1. Extracellular parasites hide away from immune detections and attack:
i.                     Through formation of protective cysts:
e.g.       Entamoeba histolytica
             Toxoplasma gondii
             Trichinella spiralis
ii.                   Living within the intestinal lumen:
e.g.        Intestinal worms
iii.            Living in places like:
                e.g.        in the eye – Oncocerca volvulus
                              in the bile duct – fasciola hepatica
                             collagen nodules – Oncocerca volvulus
  1. Resists complement destructions:
e.g.       Leishmania major – Its lipophosphoglygogen surface coat can shed the complement system once the system is attached (this resistance correlates with virulence).
Trypanosome cruzi has a glycoprotein that resembles the DAF (decay-accelerating factor) that limit the complement action.

  1. Avoidance of recognition
This is done by changing the antigenicity and immunogenicity of the parasites.
1.       Switch of antigen expression
This is done mainly by African Trypanosomes. The parasites continuously change their antigen profile, weakening the immune system and making it ineffective.
2.       Antigenic diversity among different strains and different stages.
e.g.   Leishmania
        Toxoplasma
        Plasmodium
3.       Synthesis of immunodominant molecules with repeated sequences
This repeating reduces the immunogenicity (plasmodium species). Or, the repeating sequences can be shared by many antigens on the species. So the immune system will not bother recognizing repeating sequences and the parasite is safe. (smoke-screen effect)
4.       Shedding of surface antigens
Helminths and Plasmodium secrete a lot of antigens to mop up the antibodies.
5.       Antigen mimicry
Schistosomula coat it with the ABO blood group glycolipids and MHC molecules derived from the host.
Adaptation of host antigens and synthesis of surface proteins similar to the host proteins are combinations of strategies being used by parasites such as:
e.g.   Fasciola hepatica
        Ascaris
        Tapeworms
  1. Immunosuppression
1.       Release of immunosuppressive mediators (enzymes and peptides)
These either cleave the antibodies or interfere with proper complement activation.
e.g. Schistosomes
      Trichinella spiralis
Trypanosoma cruzi (T. cruzi elaborates suppressive substances that act on CD4+ proliferation and IL-2 expression)
Plasmodium falciparum antigenic product interferes with IL-2 production and their receptor expression.
2.       Induction of suppressor cells
Plasmodia species and African Trypanosomes induce suppressor macrophages that inhibit IL-1 production.
Trypanosoma cruzi and Leishmania induce suppressor macrophages that inhibit IL-2 production.
3.       Utilization of immune effectors by parasites
e.g. Direct infection of CD4+ and CD8+ cells by Trypanosome cruzi
Consumption of IL-2 by Leishmania.
4.       Non-specific polyclonal activation of both T and B lymphocytes
This will lead to exhaustion of immune system in producing high concentration of IgG and IgM that activate effector cells but has no significant effect against parasite antigens. This mechanism is known in:
e.g.   Schistosomes
        Plasmodium falciparum
        African trypanosomes
5.       Induction of blocking antibodies
Antibodies produced against one stage of a parasite may have a blocking effect on the antibodies raised against other stages sharing the same antigenic epitopes.
e.g. IgM antibodies produced against the carbohydrate antigens released by Schistosome eggs in the early infections are able to block the IgG antibodies produced in the schistosomula stage.

Immunological consequences of parasitic infections
Immune system activated by the parasites may have significant negative effects on the host.
  1. The increased number and heightened activity of macrophages and lymphocytes in the liver and spleen cause enlargement of those organs.
                          e.g.        Malaria
              African Trypanosomes
              Visceral Leishmaniasis
  1. Granuloma formation around the Schistosome eggs within the liver is caused by T-cell dependent activities.
  2. Elephantiasis is caused by immunopathological responses to adult filariae in the lymphatics.
  3. Formation of immune complexes – in quartan malaria, immune complexes formed may deposit in the kidney, causing nephrotic syndromes.
  4. The IgE in worm infections can cause severe damage on the hose due to the release of mast-cell mediators.
e.g.       Hydatid cysts, if ruptured, can cause severe allergic response (anaphylactic shock)
Asthma-like reactions in Toxocara canis infections and Tropical Pulmonary Eosinophilia when there are worms migrating in the lung.
  1. Auto-antibodies arise as a result of polyclonal activation. The antibodies against RBCs, lymphocytes, and DNA are produced in cases of trypanosomiasis and malaria.
  2. Antibodies against the parasites may cross react with the host antigen, such as in the case of Trypanosoma cruzi infection, organs are enlarged (organomegaly – megaesophagus, megacolon, ect.), this condition is thought to be due to auto-immune effect of antibodies and cytotoxic T cells on the nerve ganglia of antibodies.
  3. Excessive production of cytokines may enhance the manifestations of disease. Fever, anemia, diarrhea and pulmonary changes in acute malaria (resembles endotoxemia) are probably caused by TNFα.
  4. Several immunological mechanisms may combine in producing pathological effects e.g. anaemia of malaria.
  5. The non-specific immunosuppression that is so widespread may explain why people with parasitic infection are especially susceptible to bacterial and viral infections.
e.g.       the patients suffering from auto-immune diseases and allergies are ‘cured’ after infected by worms
            Burkitt’s lymphoma – susceptibility is associated with malaria

Last minute quick view - Toxins

Assalamualaikum everyone. In the name of Allah the Most Beneficent the Most Merciful.

Toxins. It used to come out in the exam. Just afraid that they'll re-emerge like H1N1 or probably smallpox, I'm planning to 'vaccinate' myself and those who are concerned. BTW they're at the back of our notes (the very old very early notes probably inherited from the times of Adam and Eve). :P


Differences between endotoxins and endotoxins
Property
Endotoxins
Exotoxins
Chemical nature
LPS (lipid A – toxic)
Polypeptide
Relationship to bacteria
Part of outer membrane of G- bacteria
Soluble, secreted extracellularly
Denaturation by boiling
No
Yes
Antigenicity
Yes, weak
Yes, strong
Forms toxoid?
No
Yes
Potency
Less
Very
Specificity
No
Yes
Pyrogenicity
Yes
Hmmm, no.




Exotoxins
3 types:
  1. Neurotoxins
  2. Cytotoxins
  3. Enterotoxins
Name of toxin
Bacteria involved
Activity
Anthrax toxin (EF)
Bacillus anthracis
Edema factor (EF)  is an adenylate cyclase that causes increased levels in intracellular cyclic AMP in phagocytes and formation of ion-permeable pores in membranes (hemolysis).
Adenylate cyclase toxin
Bordetella pertussis
Acts locally to increase levels of cyclic AMP in phagocytes and formation of ion-permeable pores in membranes (hemolysis).
Cholera enterotoxin (choleragen)
Vibrio cholerae
ADP ribocylation of G proteins stimulates adenylate cyclase and increases cAMP in cells of the GI tract, causing secretion of water and electrolytes.
E. coli LT toxin
Escherichia coli
Similar to cholera toxin
E. coli ST toxin
Escherichia coli
Stimulates guanyate cyclase and promotes secretion of water and electrolytes from intestinal epithelium.
Shiga toxin
Shigella dysentriae
Enzymatically cleaves rRNA resulting in inhibition of protein synthesis in susceptible cells.
Perfringens enterotoxin
Clostridium perfringens
Stimulates adenylate cyclase leading to increased cAMP in epithelial cells.
Botulinum toxin
Clostridium botulinum
Zn2+-dependent protease that inhibits neurotransmission in neuromuscular synapse resulting in flaccid paralysis.
Tetanus toxin
Clostridium tetani
Zn2+-dependent protease that inhibits neurotransmission in inhibitory synapses in the spinal cord resulting in spastic paralysis.
Diphtheria toxin
Corynebacterium diphtheriae
ADP ribocylation of elongation factor 2 leading to inhibition of protein synthesis in target cells.
Exotoxin A
Pseudomonas aeruginosa
Inhibits protein synthesis, similar to diphtheria toxin.
Anthrax toxin (LF)
Bacillus anthracis
Lethal factor (LF) is a Zn2+-dependent protease that induces cytokine release and is cytotoxic to cells by an unknown mechanism
Pertussis toxin
Bordetella pertussis
ADP riboxylation of G proteins blocks inhibition of adenylate cyclase in susceptible cells.
Staphylococcus enterotoxins
Staphylococcus aureus
Massive activation of the immune system, including lymphocytes and macrophages, leads to emesis.
Toxic shock syndrome toxin (TSST-1)
Staphylococcus aureus
Acts on the vascular system causing inflammation, fever and shock.
Exfoliation toxin
Staphylococcus aureus
Cleavage of epidermal cells (intradermal separation).
Erythrogenic toxin (scarlet fever toxin)
Streptococcus pyogenes
Causes skin erythematous reactions.